STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPF24300.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (233 aa)    
Predicted Functional Partners:
OPF24132.1
amphi-Trp domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.695
OPF22018.1
Alpha-1 4-glucan-protein synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.654
OPF22014.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.651
OPF24125.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.612
OPF24135.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.597
OPF22886.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.584
OPF22030.1
Sodium:calcium antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.562
OPF24133.1
S9 family peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.547
OPF21450.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.506
OPF23112.1
ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.482
Your Current Organism:
Halolamina sp. CBA1230
NCBI taxonomy Id: 1853690
Other names: H. sp. CBA1230
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.