STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tb11.01.4160RING-type domain-containing protein. (278 aa)    
Predicted Functional Partners:
Tb927.6.410
Uncharacterized protein.
    
 0.752
Tb11.01.1680
Polyubiquitin, putative.
   
 0.566
Tb11.02.1280
Subtilisin-like serine peptidase.
   
 0.490
Tb11.02.1600
Ubiquitin-like protein, putative.
    
 0.473
Tb10.70.2170
Ubiquitin/ribosomal protein S27a, putative.
    
 0.473
Tb927.7.3680
Ubiquitin/ribosomal protein S27a, putative.
    
 0.473
Tb11.02.0815
Ubiquitin-conjugating enzyme, putative.
   
 0.448
Tb09.211.0050
Ubiquitin-conjugating enzyme E2, putative; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.426
Tb927.5.1000
Ubiquitin-conjugating enzyme E2, putative; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.426
Tb927.8.920
Ubiquitin-conjugating enzyme E2, putative; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.426
Your Current Organism:
Trypanosoma brucei
NCBI taxonomy Id: 185431
Other names: T. brucei brucei TREU927, Trypanosoma brucei TREU927, Trypanosoma brucei brucei TREU927, Trypanosoma brucei brucei strain 927/4 GUTat10.1, Trypanosoma brucei strain TREU927
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.