STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tb11.01.3930RNA helicase, putative. (1299 aa)    
Predicted Functional Partners:
TB927.1.1370
rRNA biogenesis protein, putative.
  
 0.659
Tb10.61.2440
Uncharacterized protein.
   
 0.650
Tb927.4.3670
CBF domain-containing protein.
   
 0.639
Tb927.8.2600
WD_REPEATS_REGION domain-containing protein.
   
 0.633
Tb10.6k15.0360
Uncharacterized protein.
   
 0.632
Tb11.01.0490
Sas10 domain-containing protein.
   
 0.625
Tb10.70.3570
DRIM domain-containing protein.
   
 0.621
Tb927.2.2950
Uncharacterized protein.
   
 0.619
Tb927.6.4350
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.599
Tb09.211.2550
WD_REPEATS_REGION domain-containing protein.
   
  0.597
Your Current Organism:
Trypanosoma brucei
NCBI taxonomy Id: 185431
Other names: T. brucei brucei TREU927, Trypanosoma brucei TREU927, Trypanosoma brucei brucei TREU927, Trypanosoma brucei brucei strain 927/4 GUTat10.1, Trypanosoma brucei strain TREU927
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.