STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tb11.01.3720Uncharacterized protein. (489 aa)    
Predicted Functional Partners:
Tb927.3.3110
Cnd3 domain-containing protein.
   
  
 0.663
Tb11.01.2530
Kinesin-like protein, putative; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.603
Tb927.3.2020
Kinesin, putative; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.603
Tb927.6.4440
Uncharacterized protein.
   
  
 0.595
Tb927.8.6090
Ubiquitin-conjugating enzyme E2, putative; Belongs to the ubiquitin-conjugating enzyme family.
   
  
 0.573
Tb10.406.0600
Structural maintenance of chromosomes protein.
   
 
 0.569
Separase
Separase, putative cysteine peptidase, Clan CD, family C50, putative.
   
 
 0.563
Tb09.211.0480
Uncharacterized protein.
   
  
 0.530
Tb927.7.5090
Uncharacterized protein.
   
 
 0.521
Tb927.8.3220
Exonuclease, putative.
   
  
 0.512
Your Current Organism:
Trypanosoma brucei
NCBI taxonomy Id: 185431
Other names: T. brucei brucei TREU927, Trypanosoma brucei TREU927, Trypanosoma brucei brucei TREU927, Trypanosoma brucei brucei strain 927/4 GUTat10.1, Trypanosoma brucei strain TREU927
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.