STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tb11.01.1650Signal recognition particle receptor alpha subunit, putative. (582 aa)    
Predicted Functional Partners:
Tb11.02.3070
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
 
0.999
Tb927.2.4090
SRP54 domain-containing protein.
   
 0.999
Tb10.61.0850
Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family.
   
 0.967
Tb927.4.1850
Uncharacterized protein.
   
 0.964
Tb09.244.2730
60S ribosomal protein L5, putative.
   
 
 0.963
Tb10.61.2700
Uncharacterized protein.
   
 
 0.958
Tb09.160.5580
60S ribosomal protein L11, putative; Belongs to the universal ribosomal protein uL5 family.
   
 
 0.946
Tb10.61.2090
60S ribosomal protein L17, putative; Belongs to the universal ribosomal protein uL22 family.
  
 
 0.932
Tb09.160.0700
60S ribosomal protein L35, putative.
   
 
 0.927
Tb11.02.4100
Pretranslocation protein, alpha subunit, putative; Belongs to the SecY/SEC61-alpha family.
  
 0.886
Your Current Organism:
Trypanosoma brucei
NCBI taxonomy Id: 185431
Other names: T. brucei brucei TREU927, Trypanosoma brucei TREU927, Trypanosoma brucei brucei TREU927, Trypanosoma brucei brucei strain 927/4 GUTat10.1, Trypanosoma brucei strain TREU927
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.