STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tb10.389.1330Membrane transporter protein, putative. (534 aa)    
Predicted Functional Partners:
Tb10.61.0330
TFIID-like protein, putative.
   
  
 0.549
Tb927.8.7120
Farnesyltransferase, putative.
  
 
 0.546
Tb927.6.4420
SAM-dependent MTase TRM10-type domain-containing protein.
   
 0.515
TB927.1.1370
rRNA biogenesis protein, putative.
  
    0.475
Tb11.01.1660
Uncharacterized protein.
  
 
 0.472
Tb10.6k15.3850
Glyceraldehyde-3-phosphate dehydrogenase.
  
  
 0.410
Tb09.211.1370
Glyceraldehyde-3-phosphate dehydrogenase, putative; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
  
 0.410
Tb927.6.4280
Glyceraldehyde-3-phosphate dehydrogenase.
  
  
 0.410
Tb927.6.4300
Glyceraldehyde-3-phosphate dehydrogenase.
  
  
 0.410
Your Current Organism:
Trypanosoma brucei
NCBI taxonomy Id: 185431
Other names: T. brucei brucei TREU927, Trypanosoma brucei TREU927, Trypanosoma brucei brucei TREU927, Trypanosoma brucei brucei strain 927/4 GUTat10.1, Trypanosoma brucei strain TREU927
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.