STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tb10.6k15.3970Developmentally regulated GTP-binding protein, putative. (368 aa)    
Predicted Functional Partners:
Tb927.8.4220
DFRP_C domain-containing protein.
   
 
 0.999
TB927.1.1220
RWD domain-containing protein.
   
 
 0.948
Tb11.46.0001
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
 
 0.745
Tb10.26.0370
40S ribosomal protein S3, putative.
   
   0.740
Tb09.160.4450
40S ribosomal protein S3, putative.
   
   0.740
Tb11.01.7960
60S ribosomal protein L2, putative.
   
 
 0.737
Tb10.61.1960
40S ribosomal protein S2, putative; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.723
Tb10.61.1390
40S ribosomal protein S13, putative; Belongs to the universal ribosomal protein uS15 family.
   
 
 0.720
Tb927.4.1860
Ribosomal protein S19, putative.
  
   0.714
Tb927.7.2340
40S ribosomal protein S15, putative; Belongs to the universal ribosomal protein uS19 family.
   
   0.712
Your Current Organism:
Trypanosoma brucei
NCBI taxonomy Id: 185431
Other names: T. brucei brucei TREU927, Trypanosoma brucei TREU927, Trypanosoma brucei brucei TREU927, Trypanosoma brucei brucei strain 927/4 GUTat10.1, Trypanosoma brucei strain TREU927
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.