STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tb10.70.7410Vesicle-associated membrane protein, putative. (239 aa)    
Predicted Functional Partners:
Tb927.5.3560
Vesicle-associated membrane protein, putative.
  
  
 
0.910
Tb927.2.5120
Vesicle-associated membrane protein, putative; Belongs to the synaptobrevin family.
     
 
0.900
Tb09.211.3920
Syntaxin, putative.
    
 
 0.733
Tb927.3.2280
Vacuolar protein sorting 33, putative; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.726
Tb927.8.3470
V-SNARE domain-containing protein.
    
 
 0.705
Tb11.01.1230
ADP-ribosylation factor GTPase activating protein, putative.
    
 0.664
Tb11.01.8000
t-SNARE coiled-coil homology domain-containing protein.
    
 0.654
Tb11.12.0013
Target SNARE, putative.
    
 0.654
Tb927.3.3720
Golgi vesicular membrane trafficking protein, putative.
   
 
 0.648
Tb10.389.0480
Vacuolar protein sorting complex subunit, putative; Belongs to the VPS16 family.
    
 
 0.630
Your Current Organism:
Trypanosoma brucei
NCBI taxonomy Id: 185431
Other names: T. brucei brucei TREU927, Trypanosoma brucei TREU927, Trypanosoma brucei brucei TREU927, Trypanosoma brucei brucei strain 927/4 GUTat10.1, Trypanosoma brucei strain TREU927
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.