STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tb10.70.7910WD_REPEATS_REGION domain-containing protein. (909 aa)    
Predicted Functional Partners:
Tb10.70.5630
Uncharacterized protein.
   
 
 0.694
Tb927.5.2980
Sec3_C domain-containing protein.
    
  0.587
Tb11.02.4970
Uncharacterized protein.
     
  0.540
Tb11.55.0019
Uncharacterized protein.
     
  0.540
Tb927.7.4490
Uncharacterized protein.
     
  0.540
Tb927.8.2580
Uncharacterized protein.
     
  0.540
Tb10.6k15.1940
Vps54 domain-containing protein.
    
 
 0.522
Tb10.61.0810
Vps53_N domain-containing protein.
    
 
 0.520
Tb927.7.1580
Uncharacterized protein.
    
 
 0.512
Your Current Organism:
Trypanosoma brucei
NCBI taxonomy Id: 185431
Other names: T. brucei brucei TREU927, Trypanosoma brucei TREU927, Trypanosoma brucei brucei TREU927, Trypanosoma brucei brucei strain 927/4 GUTat10.1, Trypanosoma brucei strain TREU927
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.