STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tb09.211.4610Vesicle-associated membrane protein, putative; Belongs to the synaptobrevin family. (205 aa)    
Predicted Functional Partners:
Tb11.01.2030
Golgi SNARE protein-like.
    
 0.999
Tb10.61.0870
SNARE protein, putative.
   
 0.999
Tb10.61.2610
Syntaxin 5.
    
 0.999
Tb09.160.0680
Sec1 family transport protein, putative; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.999
Tb927.8.3470
V-SNARE domain-containing protein.
    
 0.999
Tb927.6.2770
Vacuolar assembly protein vps41, putative.
    
 
 0.990
Tb927.3.2280
Vacuolar protein sorting 33, putative; Belongs to the STXBP/unc-18/SEC1 family.
   
 
 0.989
Tb10.389.0480
Vacuolar protein sorting complex subunit, putative; Belongs to the VPS16 family.
    
 
 0.987
Tb11.03.0965
t-SNARE coiled-coil homology domain-containing protein.
    
 0.949
Tb10.61.1380
Synaptobrevin-type vesicle transport protein, putative.
    
 0.949
Your Current Organism:
Trypanosoma brucei
NCBI taxonomy Id: 185431
Other names: T. brucei brucei TREU927, Trypanosoma brucei TREU927, Trypanosoma brucei brucei TREU927, Trypanosoma brucei brucei strain 927/4 GUTat10.1, Trypanosoma brucei strain TREU927
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.