STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tb09.160.3820Nucleolar RNA binding protein, putative. (501 aa)    
Predicted Functional Partners:
Tb11.01.5500
U3 small nucleolar ribonucleoprotein protein IMP3, putative.
   
 0.999
Tb11.01.2250
Uncharacterized protein.
   
 0.999
Tb11.01.0820
Uncharacterized protein.
   
 
 0.999
Tb11.01.0280
WD_REPEATS_REGION domain-containing protein.
   
 0.999
Tb11.01.0490
Sas10 domain-containing protein.
   
 0.999
Tb11.03.0680
Uncharacterized protein.
   
 0.999
Tb10.61.0490
PINc domain-containing protein.
   
 0.999
Tb10.61.1030
U3 snoRNA-associated protein UTP11, putative.
   
 0.999
Tb10.61.2440
Uncharacterized protein.
   
 0.999
Tb10.389.0160
Periodic tryptophan protein 2, putative.
   
 0.999
Your Current Organism:
Trypanosoma brucei
NCBI taxonomy Id: 185431
Other names: T. brucei brucei TREU927, Trypanosoma brucei TREU927, Trypanosoma brucei brucei TREU927, Trypanosoma brucei brucei strain 927/4 GUTat10.1, Trypanosoma brucei strain TREU927
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.