STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TB927.1.1670Uncharacterized protein. (1081 aa)    
Predicted Functional Partners:
Tb11.02.1990
Ferric reductase, putative.
     
 0.707
Tb10.70.6450
NOT1.
      
 0.681
Tb927.7.6270
Peptidase T, putative.
   
  
 0.543
Tb927.6.560
Cysteine peptidase C (CPC); Belongs to the peptidase C1 family.
   
 
 0.530
Tb09.211.0700
Isopentenyl-diphosphate delta-isomerase, putative.
     
 0.495
Tb11.01.5300
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
     
 0.461
Tb10.389.0070
Elongation factor TU, putative.
  
  
 0.435
Tb927.8.7020
Peptidase, putative; Belongs to the peptidase M16 family.
      
 0.433
Tb11.46.0008
Arginyl-tRNA synthetase, putative; Belongs to the class-I aminoacyl-tRNA synthetase family.
      
 0.431
Tb09.211.0680
CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.
      
 0.422
Your Current Organism:
Trypanosoma brucei
NCBI taxonomy Id: 185431
Other names: T. brucei brucei TREU927, Trypanosoma brucei TREU927, Trypanosoma brucei brucei TREU927, Trypanosoma brucei brucei strain 927/4 GUTat10.1, Trypanosoma brucei strain TREU927
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.