STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGKAPhosphoglycerate kinase. (509 aa)    
Predicted Functional Partners:
Tb11.02.3210
Triosephosphate isomerase.
 
 
 0.988
Tb10.6k15.3850
Glyceraldehyde-3-phosphate dehydrogenase.
  
 0.988
Tb09.211.1370
Glyceraldehyde-3-phosphate dehydrogenase, putative; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
 0.988
Tb927.6.4280
Glyceraldehyde-3-phosphate dehydrogenase.
  
 0.988
Tb927.6.4300
Glyceraldehyde-3-phosphate dehydrogenase.
  
 0.988
Tb10.6k15.2620
2,3-bisphosphoglycerate-independent phosphoglycerate mutase.
  
 
 0.959
PGKB
Phosphoglycerate kinase.
  
  
0.902
PGKC
Phosphoglycerate kinase.
  
  
0.902
Tb10.61.2680
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
 0.785
Tb10.70.5800
Phosphotransferase.
  
  
 0.780
Your Current Organism:
Trypanosoma brucei
NCBI taxonomy Id: 185431
Other names: T. brucei brucei TREU927, Trypanosoma brucei TREU927, Trypanosoma brucei brucei TREU927, Trypanosoma brucei brucei strain 927/4 GUTat10.1, Trypanosoma brucei strain TREU927
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.