STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tb927.5.3850XRN_N domain-containing protein. (891 aa)    
Predicted Functional Partners:
Tb10.61.1990
Ribosome biogenesis protein, putative.
   
  
 0.536
Tb10.70.3570
DRIM domain-containing protein.
   
  0.522
Tb09.160.1560
Uncharacterized protein.
   
 
  0.516
Tb11.01.0820
Uncharacterized protein.
   
 
 0.512
Tb927.2.2950
Uncharacterized protein.
   
  0.491
Tb10.70.0540
ATP-dependent DEAD/H RNA helicase, putative; Belongs to the DEAD box helicase family.
   
 0.490
Tb11.03.0680
Uncharacterized protein.
   
  0.466
Tb09.160.3820
Nucleolar RNA binding protein, putative.
   
 
 0.461
TB927.1.1370
rRNA biogenesis protein, putative.
   
 0.451
Tb927.8.1260
CLP1_P domain-containing protein.
   
 
 0.445
Your Current Organism:
Trypanosoma brucei
NCBI taxonomy Id: 185431
Other names: T. brucei brucei TREU927, Trypanosoma brucei TREU927, Trypanosoma brucei brucei TREU927, Trypanosoma brucei brucei strain 927/4 GUTat10.1, Trypanosoma brucei strain TREU927
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.