STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tb927.3.1490Leucine-rich repeat protein (LRRP), putative. (816 aa)    
Predicted Functional Partners:
Tb11.01.4320
Serine/threonine-protein phosphatase.
   
 0.547
Tb11.02.2630
Serine/threonine-protein phosphatase.
   
 0.547
Tb927.5.4380
Serine/threonine-protein phosphatase.
   
 0.547
Tb11.55.0006
Intraflagellar transport protein IFT88, putative.
  
 0.531
Tb10.70.5020
C2H2-type domain-containing protein.
    
 0.520
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 0.518
Tb10.61.1590
Intraflagellar transport protein component, putative.
    
 0.509
Tb927.3.5490
Uncharacterized protein.
    
 0.507
Tb10.26.0670
Uncharacterized protein.
    
 0.505
Tb10.61.1560
Uncharacterized protein.
   
 0.504
Your Current Organism:
Trypanosoma brucei
NCBI taxonomy Id: 185431
Other names: T. brucei brucei TREU927, Trypanosoma brucei TREU927, Trypanosoma brucei brucei TREU927, Trypanosoma brucei brucei strain 927/4 GUTat10.1, Trypanosoma brucei strain TREU927
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