STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tb927.7.2960Uncharacterized protein. (456 aa)    
Predicted Functional Partners:
Tb11.02.1760
MCU domain-containing protein.
    
 0.832
Tb11.47.0014
MCU domain-containing protein.
    
 0.832
Tb10.70.5600
MCU domain-containing protein.
    
 0.832
Tb10.100.0180
MCU domain-containing protein.
    
 0.832
Tb10.70.2920
Prohibitin.
    
 0.732
Tb927.8.4810
Prohibitin.
    
 0.660
Tb11.01.7720
Zinc finger protein, putative.
   
 0.603
Tb10.61.0730
Zinc finger protein, putative.
   
 0.603
Tb927.8.1850
Uncharacterized protein.
     
 
0.540
Tb927.5.520
Stomatin-like protein, putative.
    
 0.477
Your Current Organism:
Trypanosoma brucei
NCBI taxonomy Id: 185431
Other names: T. brucei brucei TREU927, Trypanosoma brucei TREU927, Trypanosoma brucei brucei TREU927, Trypanosoma brucei brucei strain 927/4 GUTat10.1, Trypanosoma brucei strain TREU927
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.