STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tb927.5.4440Dynein light chain. (90 aa)    
Predicted Functional Partners:
Tb11.01.8570
Dynein light intermediate chain, putative.
    
 0.779
Tb11.02.5620
Dynein light chain, putative.
    
 0.757
Tb09.211.3770
Dynein light chain, putative.
    
 0.757
Tb927.3.5540
WD_REPEATS_REGION domain-containing protein.
    
 0.755
Tb11.01.8240
Dynein light chain roadblock.
   
 0.735
Tb10.389.0350
Dynein light chain roadblock.
   
 0.735
Tb09.211.4920
Dynein light chain roadblock.
   
 0.735
Tb927.8.6950
Dynein light chain 2B, cytoplasmic, putative.
   
 0.735
Tb927.4.5370
Dynein light chain 2B, cytoplasmic, putative.
   
 0.735
Tb927.4.560
Dynein heavy chain, putative.
    
 0.711
Your Current Organism:
Trypanosoma brucei
NCBI taxonomy Id: 185431
Other names: T. brucei brucei TREU927, Trypanosoma brucei TREU927, Trypanosoma brucei brucei TREU927, Trypanosoma brucei brucei strain 927/4 GUTat10.1, Trypanosoma brucei strain TREU927
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.