STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tb927.7.5050Uncharacterized protein. (973 aa)    
Predicted Functional Partners:
Tb927.3.1140
SURP motif domain-containing protein.
   
 0.958
Tb927.6.3160
Splicing factor 3A, putative.
    
 0.953
Tb09.211.2205
Uncharacterized protein.
   
 0.930
Tb927.6.2000
Spliceosome-associated protein, putative.
   
 0.930
Tb11.01.3690
Splicing factor 3B subunit 1, putative.
    
 0.925
Tb927.7.6980
CPSF_A domain-containing protein.
   
 0.921
Tb10.6k15.3280
Uncharacterized protein.
    
 0.918
Tb927.5.3600
ATP-dependent DEAD/H RNA helicase, putative.
    
 0.918
Tb10.6k15.3190
RNA-binding protein, putative.
   
 0.912
Tb11.01.5915
Small nuclear ribonucleoprotein Sm-G.
   
 0.900
Your Current Organism:
Trypanosoma brucei
NCBI taxonomy Id: 185431
Other names: T. brucei brucei TREU927, Trypanosoma brucei TREU927, Trypanosoma brucei brucei TREU927, Trypanosoma brucei brucei strain 927/4 GUTat10.1, Trypanosoma brucei strain TREU927
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.