STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tb927.5.1990Uncharacterized protein. (334 aa)    
Predicted Functional Partners:
Tb927.6.3090
Uncharacterized protein.
   
 
 0.796
Tb927.8.5120
Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
    
 0.781
Tb927.2.5160
Chaperone protein DnaJ, putative.
    
 
 0.694
Tb10.70.5880
Uncharacterized protein.
   
 
 0.666
Tb11.01.0330
Protein kinase, putative; Belongs to the protein kinase superfamily.
   
 0.610
Tb09.160.0570
Protein kinase, putative.
   
 0.610
Tb927.3.3920
Serine/threonine-protein kinase, putative; Belongs to the protein kinase superfamily.
   
 0.610
Tb927.6.560
Cysteine peptidase C (CPC); Belongs to the peptidase C1 family.
   
 0.461
Tb927.7.830
Telomerase-associated protein, putative.
   
 
 0.456
Tb927.8.6090
Ubiquitin-conjugating enzyme E2, putative; Belongs to the ubiquitin-conjugating enzyme family.
   
 
 0.417
Your Current Organism:
Trypanosoma brucei
NCBI taxonomy Id: 185431
Other names: T. brucei brucei TREU927, Trypanosoma brucei TREU927, Trypanosoma brucei brucei TREU927, Trypanosoma brucei brucei strain 927/4 GUTat10.1, Trypanosoma brucei strain TREU927
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.