STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tb927.3.5370Uncharacterized protein. (313 aa)    
Predicted Functional Partners:
Tb927.5.440
Trans sialidase, putative.
    
 0.701
Tb927.4.4490
Multidrug resistance protein E.
    
 
 0.701
Tb927.4.3320
Uracil phosphoribosyltransferase, putative.
    
 0.634
Tb11.01.0630
Uncharacterized protein.
    
 0.531
Tb09.160.0600
Uncharacterized protein.
   
 0.524
Tb927.2.2340
Uncharacterized protein.
   
 0.517
Tb10.61.1950
SH3 domain protein, conserved.
   
 0.509
Tb09.160.1400
Uncharacterized protein.
    
 0.472
Tb927.2.1760
Uncharacterized protein.
   
 
 0.461
Tb10.70.0830
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.459
Your Current Organism:
Trypanosoma brucei
NCBI taxonomy Id: 185431
Other names: T. brucei brucei TREU927, Trypanosoma brucei TREU927, Trypanosoma brucei brucei TREU927, Trypanosoma brucei brucei strain 927/4 GUTat10.1, Trypanosoma brucei strain TREU927
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.