STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tb927.2.2130Small GTP-binding protein RAB6, putative. (230 aa)    
Predicted Functional Partners:
Tb927.3.4680
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.996
Tb927.3.2280
Vacuolar protein sorting 33, putative; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.996
Tb11.01.5610
Uncharacterized protein.
    
 0.942
Tb09.160.5300
ADP-ribosylation factor-like protein, putative.
   
 0.917
Tb10.61.0810
Vps53_N domain-containing protein.
    
 0.871
Tb10.70.4860
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
   
 0.871
Tb11.01.2990
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
    
 0.862
Tb927.7.1580
Uncharacterized protein.
    
 0.852
Tb11.02.0870
Ran-binding protein 1, putative.
    
 0.847
Tb10.6k15.1890
RanBD1 domain-containing protein.
    
 0.847
Your Current Organism:
Trypanosoma brucei
NCBI taxonomy Id: 185431
Other names: T. brucei brucei TREU927, Trypanosoma brucei TREU927, Trypanosoma brucei brucei TREU927, Trypanosoma brucei brucei strain 927/4 GUTat10.1, Trypanosoma brucei strain TREU927
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.