STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK87344.1Outer membrane receptor proteins, mostly Fe transport. (929 aa)    
Predicted Functional Partners:
SEM01359.1
TonB-dependent Receptor Plug Domain.
  
     0.750
SEL87597.1
Iron complex outermembrane recepter protein.
  
 
  0.747
SEL57855.1
Outer membrane transport energization protein TonB.
  
  0.723
SEL12208.1
TonB-dependent Receptor Plug Domain.
  
  
  0.697
SEK48379.1
Outer membrane transport energization protein TonB.
  
  0.691
SEK57619.1
TonB family C-terminal domain-containing protein.
  
  0.686
SEL24002.1
Protein TonB.
  
  0.677
SEK58188.1
TonB-dependent Receptor Plug Domain.
  
  
  0.637
SEM05422.1
Hypothetical protein; Non-canonical start codon; manually curated.
  
     0.634
SEM00595.1
TonB-dependent Receptor Plug Domain.
  
  
  0.625
Your Current Organism:
Sphingomonas sp. JS211
NCBI taxonomy Id: 1855283
Other names: S. sp. JS21-1, Sphingomonas sp. JS21-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.