STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM75156.1Hypothetical protein. (596 aa)    
Predicted Functional Partners:
SEM75122.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.990
SEL03240.1
Enoyl-CoA hydratase/isomerase.
 
 0.973
SEL08981.1
3-hydroxyacyl-CoA dehydrogenase.
 
 0.970
SEM38479.1
Electron transfer flavoprotein alpha subunit.
 0.928
SEM01429.1
Electron transfer flavoprotein alpha subunit apoprotein.
 
 0.924
SEM38510.1
Electron transfer flavoprotein beta subunit.
 
 0.914
SEM01461.1
Electron transfer flavoprotein beta subunit.
 
 0.913
SEM75019.1
Enoyl-CoA hydratase/carnithine racemase.
 
 0.898
SEM75055.1
acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.871
SEN00097.1
methylglutaconyl-CoA hydratase.
 
 0.841
Your Current Organism:
Duganella sp. CF402
NCBI taxonomy Id: 1855289
Other names: D. sp. CF402
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.