STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEJ49542.1DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains. (457 aa)    
Predicted Functional Partners:
SEJ35727.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 0.961
SEJ49525.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 0.956
SEJ81446.1
PAS domain S-box-containing protein.
  
 0.914
SEJ47390.1
PAS domain S-box-containing protein.
  
 0.905
SEJ22381.1
Signal transduction histidine kinase.
  
 0.872
SEJ19269.1
PAS domain S-box-containing protein.
  
 0.862
SEI56408.1
Predicted ATPase.
 
 0.854
SEI96721.1
Signal transduction histidine kinase.
  
 0.839
SEI74679.1
RNA polymerase, sigma 54 subunit, RpoN/SigL.
 
  
 0.820
SEI59558.1
ABC-type sugar transport system, substrate-binding protein, contains N-terminal xre family HTH domain.
   
 0.781
Your Current Organism:
Dyadobacter sp. SG02
NCBI taxonomy Id: 1855291
Other names: D. sp. SG02
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