STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS08916.1Lipocalin-like domain-containing protein. (161 aa)    
Predicted Functional Partners:
SFS04027.1
Collagen, middle region.
  
     0.651
SFS14490.1
Inward rectifier potassium channel.
  
     0.610
SFS13496.1
Filamentous hemagglutinin family N-terminal domain-containing protein.
  
     0.608
SFS18879.1
LTXXQ motif family protein.
  
     0.569
SFS08922.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
       0.530
SFR94964.1
Putative Ig domain-containing protein.
  
     0.511
SFR89251.1
L-threonine O-3-phosphate decarboxylase.
  
  
  0.497
SFS04035.1
Hemolysin activation/secretion protein.
  
     0.481
SFR89447.1
Spore coat protein U (SCPU) domain-containing protein.
  
     0.464
SFS11826.1
Alginate lyase.
  
     0.453
Your Current Organism:
Dyella sp. OK004
NCBI taxonomy Id: 1855292
Other names: D. sp. OK004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.