STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS13606.1Type VI secretion system protein. (157 aa)    
Predicted Functional Partners:
SFS13591.1
Pentapeptide repeat-containing protein.
       0.816
SFS13609.1
Type VI secretion system protein ImpJ.
       0.795
SFS13614.1
Type VI secretion system protein ImpK.
       0.795
SFS13618.1
Type VI secretion system protein ImpL.
       0.795
SFS13602.1
Protein of unknown function.
       0.793
SFS13580.1
Type VI secretion system protein ImpG.
       0.792
SFS13584.1
Type VI secretion system protein ImpH.
       0.792
SFS13576.1
Hypothetical protein.
       0.783
SFS13595.1
Uncharacterized protein YjbI, contains pentapeptide repeats.
       0.778
SFS13598.1
Protein of unknown function.
       0.776
Your Current Organism:
Dyella sp. OK004
NCBI taxonomy Id: 1855292
Other names: D. sp. OK004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.