STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM52446.13',5'-cyclic AMP phosphodiesterase CpdA. (337 aa)    
Predicted Functional Partners:
SHN10624.1
Signal transduction histidine kinase.
  
 
 0.935
SHM96645.1
Signal transduction histidine kinase.
  
 
 0.838
SHL87724.1
Lysophospholipase L1.
  
     0.740
SHM52477.1
Phosphoglycerate mutase.
       0.722
SHM52417.1
Arylsulfatase A.
 
     0.703
SHM77695.1
Protein of unknown function.
  
     0.703
SHL99188.1
Lysophospholipase L1.
  
     0.688
SHN20604.1
PAS domain S-box-containing protein.
    
 0.688
SHM52361.1
Arylsulfatase A.
 
     0.675
SHM76121.1
Hypothetical protein.
  
     0.638
Your Current Organism:
Mucilaginibacter sp. OK098
NCBI taxonomy Id: 1855297
Other names: M. sp. OK098
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.