STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFU77478.1Thiosulfate sulfurtransferase. (145 aa)    
Predicted Functional Partners:
SFU50017.1
Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 
 0.662
SFU65347.1
Signal transduction histidine kinase.
     
 0.662
ybeY
Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
    
   0.645
SFU47246.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 
  0.634
rpsQ
SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
   
   0.605
rplQ
LSU ribosomal protein L17P.
   
   0.545
SFU63591.1
Fe-S oxidoreductase.
 
  
 0.540
rplU
LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
   
   0.539
SFU53575.1
Molybdopterin synthase subunit MoaD.
 
  
 0.528
SFU59234.1
CDP-4-dehydro-6-deoxyglucose reductase.
   
 
 0.518
Your Current Organism:
Polaromonas sp. YR568
NCBI taxonomy Id: 1855301
Other names: P. sp. YR568
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.