STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV03676.1Outer membrane lipoprotein LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. (134 aa)    
Predicted Functional Partners:
ispE
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.
  
    0.769
SFU79830.1
Protein of unknown function.
  
     0.766
SFU86164.1
HemY protein.
 
     0.764
SFU94278.1
Protein of unknown function.
  
     0.758
SFU87847.1
Etoposide-induced protein 2.4 (EI24).
  
     0.753
SFU71541.1
Lipopolysaccharide export system protein LptC.
  
   
 0.752
SFV03682.1
Flp pilus assembly protein TadD, contains TPR repeats.
 
     0.736
SFV00839.1
Uncharacterized protein.
  
     0.718
SFU80852.1
ATP synthase protein I.
  
     0.713
SFU31647.1
4-amino-4-deoxy-L-arabinose transferase.
  
    0.705
Your Current Organism:
Polaromonas sp. YR568
NCBI taxonomy Id: 1855301
Other names: P. sp. YR568
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