STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH55568.1Two-component system, OmpR family, sensor kinase. (444 aa)    
Predicted Functional Partners:
SEI05117.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.984
SEI06954.1
PAS domain S-box-containing protein.
 
 
0.976
SEH55583.1
Two component transcriptional regulator, winged helix family.
 
 0.973
SEI20587.1
PAS domain S-box-containing protein.
 
 
 0.972
SEH75177.1
PAS/PAC sensor hybrid histidine kinase.
   
 0.967
SEH51809.1
Signal transduction histidine kinase.
 
 
0.963
SEI23605.1
Bacteriophytochrome (light-regulated signal transduction histidine kinase).
   
 0.954
SEH81022.1
Two-component system, OmpR family, KDP operon response regulator KdpE.
 
 0.931
SEI20627.1
PAS domain S-box-containing protein.
   
 0.905
SEH46412.1
Regulatory protein, luxR family.
 
 0.904
Your Current Organism:
Tardiphaga sp. OK245
NCBI taxonomy Id: 1855306
Other names: T. sp. OK245
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.