STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH78896.1Hypothetical protein; Manually curated. (76 aa)    
Predicted Functional Partners:
SEH52424.1
Protein of unknown function.
  
     0.749
SEH56734.1
Metal dependent phosphohydrolase.
  
     0.749
SEH86941.1
dCTP deaminase.
  
     0.730
hisS
histidyl-tRNA synthetase.
  
     0.724
SEH77856.1
Protein of unknown function.
  
     0.695
SEI17374.1
Two-component system, sensor histidine kinase RegB.
  
     0.691
SEI09435.1
Hypothetical protein.
  
     0.674
SEI17547.1
Signal transduction histidine kinase.
  
     0.648
SEH78880.1
Endonuclease YncB, thermonuclease family.
       0.585
SEH78912.1
16S rRNA (cytosine967-C5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
       0.571
Your Current Organism:
Tardiphaga sp. OK245
NCBI taxonomy Id: 1855306
Other names: T. sp. OK245
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.