STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI16146.1Putative spermidine/putrescine transport system substrate-binding protein. (387 aa)    
Predicted Functional Partners:
SEI16133.1
Putative spermidine/putrescine transport system permease protein.
 
  
  0.948
SEI16127.1
Putative spermidine/putrescine transport system permease protein.
 
  
  0.938
SEI16139.1
Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
  0.745
SEH53296.1
Putative spermidine/putrescine transport system permease protein.
    
  0.742
SEI19156.1
Putative spermidine/putrescine transport system permease protein.
    
  0.742
SEH55624.1
iron(III) transport system permease protein.
    
  0.653
SEI04088.1
Hypothetical protein.
  
     0.608
SEI09009.1
Fibronectin-binding autotransporter adhesin.
  
     0.579
SEI04181.1
Hypothetical protein.
  
     0.559
SEH43522.1
Transmembrane transcriptional regulator (anti-sigma factor RsiW).
 
     0.552
Your Current Organism:
Tardiphaga sp. OK245
NCBI taxonomy Id: 1855306
Other names: T. sp. OK245
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.