STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI23327.1Antibiotic biosynthesis monooxygenase. (101 aa)    
Predicted Functional Partners:
SEI23330.1
Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.655
SEI23334.1
Putative spermidine/putrescine transport system permease protein.
       0.655
SEI23337.1
Putative spermidine/putrescine transport system permease protein.
       0.655
SEI23340.1
Putative spermidine/putrescine transport system substrate-binding protein.
       0.577
SEH50074.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
  
     0.422
SEI22235.1
Protein N-acetyltransferase, RimJ/RimL family.
  
     0.414
SEH50061.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
  
     0.407
SEI20135.1
ABC-type branched-chain amino acid transport system, substrate-binding protein.
  
     0.407
SEI13985.1
Branched-chain amino acid transport system substrate-binding protein.
  
     0.406
SEH50100.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
  
     0.401
Your Current Organism:
Tardiphaga sp. OK245
NCBI taxonomy Id: 1855306
Other names: T. sp. OK245
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.