STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDC75243.1Hopanoid-associated phosphorylase. (224 aa)    
Predicted Functional Partners:
SDC75270.1
Squalene-hopene/tetraprenyl-beta-curcumene cyclase.
 
   
 0.950
SDC75304.1
Farnesyl-diphosphate farnesyltransferase.
 
   
 0.877
SDC75728.1
Hopanoid biosynthesis associated radical SAM protein HpnH.
 
   
 0.803
SDC75671.1
Hypothetical protein.
 
     0.793
SDC62112.1
Flagellar motor switch protein FliM.
    
   0.791
SDC75798.1
Hopene-associated glycosyltransferase HpnB.
 
     0.785
SDB99363.1
Putative membrane protein.
 
     0.780
SDC75781.1
Dihydroflavonol-4-reductase.
 
     0.770
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
 0.724
rlmN
23S rRNA m(2)A-2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.
    
 0.701
Your Current Organism:
Cupriavidus sp. YR651
NCBI taxonomy Id: 1855315
Other names: C. sp. YR651
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.