STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE02630.1Hypothetical protein. (92 aa)    
Predicted Functional Partners:
SDD81603.1
DNA replication protein DnaC.
 
  
 0.691
SDE02607.1
Hypothetical protein.
       0.455
SDD81575.1
Transposase.
  
     0.438
SDD83063.1
IS66 C-terminal element.
  
     0.423
SDC17976.1
Membrane-bound serine protease (ClpP class).
   
    0.410
SDC18008.1
SPFH domain, Band 7 family protein.
   
    0.410
SDD85336.1
Protein of unknown function.
  
     0.408
SDD17508.1
Plasmid replication initiator protein.
  
     0.402
Your Current Organism:
Cupriavidus sp. YR651
NCBI taxonomy Id: 1855315
Other names: C. sp. YR651
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.