STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP54418.1Tripartite-type tricarboxylate transporter, receptor component TctC. (328 aa)    
Predicted Functional Partners:
SFP54447.1
3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit.
       0.773
SFP54472.1
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit.
       0.773
SFP54495.1
Haloacetate dehalogenase.
       0.773
SFO68999.1
TctA family transporter.
 
 
  0.713
SFQ65085.1
TctA family transporter.
 
 
  0.709
SFO68968.1
Tripartite tricarboxylate transporter TctB family protein.
 
 
  0.708
SFP14246.1
TctA family transporter.
 
 
  0.707
SFP14221.1
Tripartite tricarboxylate transporter TctB family protein.
 
 
  0.705
SFQ65073.1
Tripartite tricarboxylate transporter TctB family protein.
 
 
  0.701
SFP73022.1
TctA family transporter.
 
 
  0.623
Your Current Organism:
Variovorax sp. OK605
NCBI taxonomy Id: 1855317
Other names: V. sp. OK605
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.