STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP87526.1Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (TC 3.A.1.4.-). (241 aa)    
Predicted Functional Partners:
SFP87575.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-).
 
 
  0.980
SFP87557.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family.
 
  0.966
SFP87594.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family (TC 3.A.1.4.-).
 
 
  0.944
SFO53331.1
Branched-chain amino acid transport system permease protein.
  
 
  0.914
SFP56987.1
Branched-chain amino acid transport system permease protein.
  
 
  0.894
SFO62083.1
Branched-chain amino acid transport system permease protein.
  
 
  0.892
SFO75064.1
Branched-chain amino acid transport system permease protein.
  
 
  0.892
SFP87543.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
 
 
 
0.888
SFO67976.1
Branched-chain amino acid transport system permease protein.
  
 
  0.886
SFO97081.1
Branched-chain amino acid transport system permease protein.
  
 
  0.886
Your Current Organism:
Variovorax sp. OK605
NCBI taxonomy Id: 1855317
Other names: V. sp. OK605
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.