Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFH70826.1 | SFH86337.1 | SAMN05216525_101436 | SAMN05216525_102323 | uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | uroporphyrinogen-III C-methyltransferase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. | 0.974 |
SFH70826.1 | SFI23141.1 | SAMN05216525_101436 | SAMN05216525_10670 | uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | Hypothetical protein. | 0.413 |
SFH70826.1 | SFJ56992.1 | SAMN05216525_101436 | SAMN05216525_12890 | uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | Hypothetical protein. | 0.411 |
SFH86337.1 | SFH70826.1 | SAMN05216525_102323 | SAMN05216525_101436 | uroporphyrinogen-III C-methyltransferase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. | uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | 0.974 |
SFH86337.1 | SFI23141.1 | SAMN05216525_102323 | SAMN05216525_10670 | uroporphyrinogen-III C-methyltransferase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. | Hypothetical protein. | 0.509 |
SFH86337.1 | SFJ56992.1 | SAMN05216525_102323 | SAMN05216525_12890 | uroporphyrinogen-III C-methyltransferase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. | Hypothetical protein. | 0.498 |
SFI23141.1 | SFH70826.1 | SAMN05216525_10670 | SAMN05216525_101436 | Hypothetical protein. | uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | 0.413 |
SFI23141.1 | SFH86337.1 | SAMN05216525_10670 | SAMN05216525_102323 | Hypothetical protein. | uroporphyrinogen-III C-methyltransferase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. | 0.509 |
SFI23141.1 | SFI23168.1 | SAMN05216525_10670 | SAMN05216525_10671 | Hypothetical protein. | DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain. | 0.631 |
SFI23141.1 | SFI23184.1 | SAMN05216525_10670 | SAMN05216525_10672 | Hypothetical protein. | Uncharacterized conserved protein, DUF983 family. | 0.459 |
SFI23141.1 | SFI40550.1 | SAMN05216525_10670 | SAMN05216525_10895 | Hypothetical protein. | Uncharacterized conserved protein, DUF169 family. | 0.472 |
SFI23141.1 | SFJ25072.1 | SAMN05216525_10670 | SAMN05216525_12127 | Hypothetical protein. | TRAP-type C4-dicarboxylate transport system, small permease component. | 0.406 |
SFI23141.1 | SFJ56992.1 | SAMN05216525_10670 | SAMN05216525_12890 | Hypothetical protein. | Hypothetical protein. | 0.445 |
SFI23141.1 | SFJ83265.1 | SAMN05216525_10670 | SAMN05216525_13812 | Hypothetical protein. | Hypothetical protein. | 0.553 |
SFI23141.1 | nadX | SAMN05216525_10670 | SAMN05216525_106116 | Hypothetical protein. | Aspartate dehydrogenase; Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate. | 0.406 |
SFI23168.1 | SFI23141.1 | SAMN05216525_10671 | SAMN05216525_10670 | DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain. | Hypothetical protein. | 0.631 |
SFI23168.1 | SFI23184.1 | SAMN05216525_10671 | SAMN05216525_10672 | DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain. | Uncharacterized conserved protein, DUF983 family. | 0.557 |
SFI23184.1 | SFI23141.1 | SAMN05216525_10672 | SAMN05216525_10670 | Uncharacterized conserved protein, DUF983 family. | Hypothetical protein. | 0.459 |
SFI23184.1 | SFI23168.1 | SAMN05216525_10672 | SAMN05216525_10671 | Uncharacterized conserved protein, DUF983 family. | DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain. | 0.557 |
SFI40550.1 | SFI23141.1 | SAMN05216525_10895 | SAMN05216525_10670 | Uncharacterized conserved protein, DUF169 family. | Hypothetical protein. | 0.472 |
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