Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFH74120.1 | SFI09627.1 | SAMN05216525_101602 | SAMN05216525_10485 | Hypothetical protein. | Uncharacterized conserved protein, LabA/DUF88 family. | 0.408 |
SFH74120.1 | SFI83232.1 | SAMN05216525_101602 | SAMN05216525_114125 | Hypothetical protein. | Signal transduction histidine kinase. | 0.549 |
SFH74120.1 | SFJ02669.1 | SAMN05216525_101602 | SAMN05216525_11793 | Hypothetical protein. | Methyltransferase domain-containing protein. | 0.704 |
SFH74120.1 | SFJ72385.1 | SAMN05216525_101602 | SAMN05216525_13342 | Hypothetical protein. | Uncharacterized conserved protein, LabA/DUF88 family. | 0.408 |
SFH74120.1 | SFJ75467.1 | SAMN05216525_101602 | SAMN05216525_13463 | Hypothetical protein. | Transcriptional regulator, contains XRE-family HTH domain. | 0.400 |
SFI02707.1 | SFI09627.1 | SAMN05216525_103419 | SAMN05216525_10485 | Helix-turn-helix. | Uncharacterized conserved protein, LabA/DUF88 family. | 0.519 |
SFI02707.1 | SFI83232.1 | SAMN05216525_103419 | SAMN05216525_114125 | Helix-turn-helix. | Signal transduction histidine kinase. | 0.623 |
SFI02707.1 | SFJ02669.1 | SAMN05216525_103419 | SAMN05216525_11793 | Helix-turn-helix. | Methyltransferase domain-containing protein. | 0.660 |
SFI02707.1 | SFJ72385.1 | SAMN05216525_103419 | SAMN05216525_13342 | Helix-turn-helix. | Uncharacterized conserved protein, LabA/DUF88 family. | 0.502 |
SFI09627.1 | SFH74120.1 | SAMN05216525_10485 | SAMN05216525_101602 | Uncharacterized conserved protein, LabA/DUF88 family. | Hypothetical protein. | 0.408 |
SFI09627.1 | SFI02707.1 | SAMN05216525_10485 | SAMN05216525_103419 | Uncharacterized conserved protein, LabA/DUF88 family. | Helix-turn-helix. | 0.519 |
SFI09627.1 | SFJ02669.1 | SAMN05216525_10485 | SAMN05216525_11793 | Uncharacterized conserved protein, LabA/DUF88 family. | Methyltransferase domain-containing protein. | 0.661 |
SFI09627.1 | SFJ75467.1 | SAMN05216525_10485 | SAMN05216525_13463 | Uncharacterized conserved protein, LabA/DUF88 family. | Transcriptional regulator, contains XRE-family HTH domain. | 0.507 |
SFI12392.1 | SFJ02669.1 | SAMN05216525_104232 | SAMN05216525_11793 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Methyltransferase domain-containing protein. | 0.816 |
SFI12392.1 | SFJ36932.1 | SAMN05216525_104232 | SAMN05216525_12372 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Amino acid adenylation domain-containing protein. | 0.999 |
SFI12392.1 | cysC | SAMN05216525_104232 | SAMN05216525_102321 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Adenylylsulfate kinase /sulfate adenylyltransferase subunit 1; Catalyzes the synthesis of activated sulfate. | 0.591 |
SFI12392.1 | gcvP | SAMN05216525_104232 | SAMN05216525_10582 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.894 |
SFI83232.1 | SFH74120.1 | SAMN05216525_114125 | SAMN05216525_101602 | Signal transduction histidine kinase. | Hypothetical protein. | 0.549 |
SFI83232.1 | SFI02707.1 | SAMN05216525_114125 | SAMN05216525_103419 | Signal transduction histidine kinase. | Helix-turn-helix. | 0.623 |
SFI83232.1 | SFJ02669.1 | SAMN05216525_114125 | SAMN05216525_11793 | Signal transduction histidine kinase. | Methyltransferase domain-containing protein. | 0.684 |
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