STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK10674.1ABC-2 type transport system ATP-binding protein. (312 aa)    
Predicted Functional Partners:
SFK10658.1
ABC-2 type transport system permease protein.
 
 0.989
SFK10639.1
ABC-type uncharacterized transport system.
 
   
 0.925
SFK23798.1
ABC-2 type transport system permease protein.
 
 
 0.914
SFI25912.1
ABC-2 type transport system permease protein.
  
 0.885
SFK10597.1
HupE / UreJ protein.
       0.773
SFK10618.1
Hypothetical protein.
       0.773
SFH74656.1
Twin-arg-translocated uncharacterized repeat-containing protein.
  
 0.690
SFI30795.1
ATP-binding cassette, subfamily B.
  
 
 
0.663
SFJ87680.1
ATP-binding cassette, subfamily B.
  
 
 
0.653
ndvA
ATP-binding cassette, subfamily B; Involved in Beta-(1-->2)glucan export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
  
 
 
0.648
Your Current Organism:
Bradyrhizobium sp. Gha
NCBI taxonomy Id: 1855318
Other names: B. sp. Gha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.