STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP98262.1Outer membrane protein TolC. (474 aa)    
Predicted Functional Partners:
SFP98180.1
Cu and Ag efflux protein CusF.
 
 0.954
SFP98237.1
Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA).
 
   
 0.899
SFP98208.1
Uncharacterized copper-binding protein, cupredoxin-like subfamily.
 
     0.875
SFP98290.1
Hypothetical protein.
       0.800
SFN94262.1
Membrane fusion protein, multidrug efflux system.
  
 0.693
SFN76947.1
HlyD family secretion protein.
  
 0.693
SFN87217.1
Membrane fusion protein, multidrug efflux system.
  
 0.693
SFO51488.1
Membrane fusion protein, multidrug efflux system.
  
 0.693
SFO57908.1
HlyD family secretion protein.
  
 0.693
SFO68746.1
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.693
Your Current Organism:
Bradyrhizobium sp. Ghvi
NCBI taxonomy Id: 1855319
Other names: B. sp. Ghvi
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