STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH68744.1Sugar lactone lactonase YvrE. (295 aa)    
Predicted Functional Partners:
SDI61876.1
Galactose 1-dehydrogenase.
 
 
 0.754
SDI98874.1
Gluconolactonase.
  
  
  0.744
SDG72249.1
Gluconolactonase.
  
  
  0.709
SDG54703.1
Gluconate kinase, SKI family.
 
  
 0.699
SDJ67185.1
Gluconate 2-dehydrogenase gamma chain.
     
 0.623
SDI04915.1
Quinoprotein glucose dehydrogenase.
  
  
 0.571
SDJ00710.1
Beta-glucanase, GH16 family.
     
 0.567
SDI92376.1
Choline dehydrogenase.
  
 
  0.564
SDH24907.1
Predicted dehydrogenase.
 
 
 0.555
SDG37604.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
 
  
 0.550
Your Current Organism:
Bradyrhizobium sp. Rc2d
NCBI taxonomy Id: 1855321
Other names: B. sp. Rc2d
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.