STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ96475.1Acyl-CoA dehydrogenase. (555 aa)    
Predicted Functional Partners:
SDG54268.1
NADPH-dependent glutamate synthase beta chain.
  
 0.999
SDH18530.1
NAD-dependent formate dehydrogenase flavoprotein subunit.
  
 0.999
SDH16693.1
Amino acid adenylation domain-containing protein.
  
 0.999
SDI13496.1
D-alanine--poly(phosphoribitol) ligase subunit 1; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.999
SDJ03560.1
Ubiquinol-cytochrome c reductase cytochrome b/c1 subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
   
 0.999
rplX
LSU ribosomal protein L24P; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.
   
   0.999
SDK19119.1
AMP-binding enzyme.
  
 0.999
SDG83822.1
4Fe-4S binding domain-containing protein.
  
 0.998
nuoI
NADH dehydrogenase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
 0.998
SDG72998.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
 
 0.997
Your Current Organism:
Bradyrhizobium sp. Rc2d
NCBI taxonomy Id: 1855321
Other names: B. sp. Rc2d
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.