STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK15795.1uracil-DNA glycosylase, family 4. (224 aa)    
Predicted Functional Partners:
SDI35677.1
DNA polymerase.
  
  
 0.937
SDI94703.1
DNA polymerase.
  
  
 0.898
SDK09699.1
DNA polymerase.
  
  
 0.897
SDK15767.1
NYN domain-containing protein.
       0.787
SDJ69827.1
Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
   
   0.736
SDG92815.1
tRNA threonylcarbamoyladenosine biosynthesis protein TsaB.
  
    0.657
SDG57880.1
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
    
   0.617
SDJ76081.1
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
    
   0.617
gpmA
Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
  
    0.582
Your Current Organism:
Bradyrhizobium sp. Rc2d
NCBI taxonomy Id: 1855321
Other names: B. sp. Rc2d
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.