Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFM80300.1 | SFM80314.1 | SAMN05216573_104379 | SAMN05216573_104380 | Putative spermidine/putrescine transport system substrate-binding protein. | Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily. | 0.939 |
SFM80300.1 | SFM80332.1 | SAMN05216573_104379 | SAMN05216573_104381 | Putative spermidine/putrescine transport system substrate-binding protein. | Putative spermidine/putrescine transport system permease protein. | 0.973 |
SFM80300.1 | SFM80345.1 | SAMN05216573_104379 | SAMN05216573_104382 | Putative spermidine/putrescine transport system substrate-binding protein. | Putative spermidine/putrescine transport system permease protein. | 0.978 |
SFM80300.1 | SFM80363.1 | SAMN05216573_104379 | SAMN05216573_104383 | Putative spermidine/putrescine transport system substrate-binding protein. | Hypothetical protein. | 0.899 |
SFM80300.1 | SFM80379.1 | SAMN05216573_104379 | SAMN05216573_104384 | Putative spermidine/putrescine transport system substrate-binding protein. | 2Fe-2S iron-sulfur cluster binding domain-containing protein. | 0.846 |
SFM80300.1 | SFM80394.1 | SAMN05216573_104379 | SAMN05216573_104385 | Putative spermidine/putrescine transport system substrate-binding protein. | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | 0.873 |
SFM80300.1 | SFM80408.1 | SAMN05216573_104379 | SAMN05216573_104386 | Putative spermidine/putrescine transport system substrate-binding protein. | Sarcosine oxidase subunit beta. | 0.892 |
SFM80300.1 | SFN21567.1 | SAMN05216573_104379 | SAMN05216573_109333 | Putative spermidine/putrescine transport system substrate-binding protein. | Putative spermidine/putrescine transport system permease protein. | 0.830 |
SFM80300.1 | SFN78063.1 | SAMN05216573_104379 | SAMN05216573_12162 | Putative spermidine/putrescine transport system substrate-binding protein. | Putative spermidine/putrescine transport system permease protein. | 0.955 |
SFM80300.1 | SFN96441.1 | SAMN05216573_104379 | SAMN05216573_1344 | Putative spermidine/putrescine transport system substrate-binding protein. | Putative spermidine/putrescine transport system permease protein. | 0.954 |
SFM80314.1 | SFM80300.1 | SAMN05216573_104380 | SAMN05216573_104379 | Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily. | Putative spermidine/putrescine transport system substrate-binding protein. | 0.939 |
SFM80314.1 | SFM80332.1 | SAMN05216573_104380 | SAMN05216573_104381 | Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily. | Putative spermidine/putrescine transport system permease protein. | 0.983 |
SFM80314.1 | SFM80345.1 | SAMN05216573_104380 | SAMN05216573_104382 | Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily. | Putative spermidine/putrescine transport system permease protein. | 0.981 |
SFM80314.1 | SFM80363.1 | SAMN05216573_104380 | SAMN05216573_104383 | Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily. | Hypothetical protein. | 0.816 |
SFM80314.1 | SFM80379.1 | SAMN05216573_104380 | SAMN05216573_104384 | Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily. | 2Fe-2S iron-sulfur cluster binding domain-containing protein. | 0.719 |
SFM80314.1 | SFM80394.1 | SAMN05216573_104380 | SAMN05216573_104385 | Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily. | NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase. | 0.777 |
SFM80314.1 | SFM80408.1 | SAMN05216573_104380 | SAMN05216573_104386 | Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily. | Sarcosine oxidase subunit beta. | 0.734 |
SFM80314.1 | SFN21567.1 | SAMN05216573_104380 | SAMN05216573_109333 | Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily. | Putative spermidine/putrescine transport system permease protein. | 0.774 |
SFM80314.1 | SFN78063.1 | SAMN05216573_104380 | SAMN05216573_12162 | Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily. | Putative spermidine/putrescine transport system permease protein. | 0.986 |
SFM80314.1 | SFN96441.1 | SAMN05216573_104380 | SAMN05216573_1344 | Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily. | Putative spermidine/putrescine transport system permease protein. | 0.986 |
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