STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS05316.1Hypothetical protein. (260 aa)    
Predicted Functional Partners:
SDS05282.1
Hypothetical protein.
 
     0.868
SDS05340.1
RNA polymerase sigma-70 factor, ECF subfamily.
 
     0.800
SDR76496.1
Acyl-CoA-binding protein.
  
     0.618
SDS07501.1
Activator of Hsp90 ATPase homolog 1-like protein.
  
     0.610
SDR72912.1
Hypothetical protein.
  
     0.563
SDS36170.1
Hypothetical protein.
  
     0.548
SDR72875.1
Uncharacterised nucleotidyltransferase.
  
     0.545
SDS05365.1
Hypothetical protein.
       0.534
SDR87723.1
Hypothetical protein.
  
     0.526
SDS26174.1
Uncharacterised nucleotidyltransferase.
  
     0.521
Your Current Organism:
Polaribacter sp. KT25b
NCBI taxonomy Id: 1855336
Other names: P. sp. KT25b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.