STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM15045.1Glycogen(starch) synthase. (387 aa)    
Predicted Functional Partners:
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
  0.891
SHL99604.1
Exosortase A system-associated hydrolase 2.
    
   0.713
SHL77335.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.671
SHL99711.1
UDP-N-acetylglucosamine 4-epimerase.
  
 
  0.629
SHM00020.1
Mannose-1-phosphate guanylyltransferase (GDP); Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.598
SHM15019.1
Choline dehydrogenase.
  
    0.596
SHL91648.1
Sugar transferase, PEP-CTERM system associated/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
 
 0.559
SHM00704.1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
  
 
 0.559
SHL24949.1
UDP-glucose 4-epimerase.
  
 
  0.505
SHL78043.1
Dolichol-phosphate mannosyltransferase.
  
 
  0.491
Your Current Organism:
Nitrosospira sp. Nsp11
NCBI taxonomy Id: 1855338
Other names: N. sp. Nsp11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.