STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP35302.1Phenylpropionate dioxygenase, large terminal subunit. (368 aa)    
Predicted Functional Partners:
SEP41048.1
CDP-4-dehydro-6-deoxyglucose reductase.
 
 
 0.970
SEP02581.1
Choline dehydrogenase.
 
  
 0.932
SEO37065.1
Pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.833
SEP35286.1
SpoIIAA-like.
 
     0.831
SEO66485.1
Protocatechuate 3,4-dioxygenase beta subunit.
 
 
 0.759
SEO60566.1
2,4-dienoyl-CoA reductase.
    
 0.748
SEP24937.1
Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase.
   
 
 0.739
SEP21067.1
Succinate dehydrogenase subunit A.
     
 0.738
SEO74029.1
DedD protein.
  
     0.723
SEO58643.1
Sulfide:quinone oxidoreductase.
  
 
 0.721
Your Current Organism:
Nitrosovibrio sp. Nv6
NCBI taxonomy Id: 1855340
Other names: N. sp. Nv6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.