Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEB77284.1 | SEB77324.1 | SAMN05216483_0392 | SAMN05216483_0393 | Histidine kinase. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.989 |
SEB77284.1 | SEB77374.1 | SAMN05216483_0392 | SAMN05216483_0394 | Histidine kinase. | Glycosyltransferase involved in cell wall bisynthesis. | 0.873 |
SEB77284.1 | SEB77419.1 | SAMN05216483_0392 | SAMN05216483_0395 | Histidine kinase. | Hypothetical protein. | 0.873 |
SEB77284.1 | SEC05265.1 | SAMN05216483_0392 | SAMN05216483_0960 | Histidine kinase. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.883 |
SEB77284.1 | SEC33671.1 | SAMN05216483_0392 | SAMN05216483_1501 | Histidine kinase. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.872 |
SEB77284.1 | SEC35130.1 | SAMN05216483_0392 | SAMN05216483_1531 | Histidine kinase. | Signal transduction histidine kinase. | 0.999 |
SEB77284.1 | SEC53707.1 | SAMN05216483_0392 | SAMN05216483_1894 | Histidine kinase. | Response regulator receiver domain-containing protein. | 0.892 |
SEB77284.1 | SEC55867.1 | SAMN05216483_0392 | SAMN05216483_1936 | Histidine kinase. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.884 |
SEB77284.1 | SEC74608.1 | SAMN05216483_0392 | SAMN05216483_2318 | Histidine kinase. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.881 |
SEB77284.1 | SED31671.1 | SAMN05216483_0392 | SAMN05216483_3583 | Histidine kinase. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.873 |
SEB77324.1 | SEB77284.1 | SAMN05216483_0393 | SAMN05216483_0392 | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | Histidine kinase. | 0.989 |
SEB77324.1 | SEB77374.1 | SAMN05216483_0393 | SAMN05216483_0394 | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | Glycosyltransferase involved in cell wall bisynthesis. | 0.792 |
SEB77324.1 | SEB77419.1 | SAMN05216483_0393 | SAMN05216483_0395 | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | Hypothetical protein. | 0.792 |
SEB77324.1 | SEC35130.1 | SAMN05216483_0393 | SAMN05216483_1531 | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | Signal transduction histidine kinase. | 0.997 |
SEB77374.1 | SEB77284.1 | SAMN05216483_0394 | SAMN05216483_0392 | Glycosyltransferase involved in cell wall bisynthesis. | Histidine kinase. | 0.873 |
SEB77374.1 | SEB77324.1 | SAMN05216483_0394 | SAMN05216483_0393 | Glycosyltransferase involved in cell wall bisynthesis. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.792 |
SEB77374.1 | SEB77419.1 | SAMN05216483_0394 | SAMN05216483_0395 | Glycosyltransferase involved in cell wall bisynthesis. | Hypothetical protein. | 0.994 |
SEB77419.1 | SEB77284.1 | SAMN05216483_0395 | SAMN05216483_0392 | Hypothetical protein. | Histidine kinase. | 0.873 |
SEB77419.1 | SEB77324.1 | SAMN05216483_0395 | SAMN05216483_0393 | Hypothetical protein. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.792 |
SEB77419.1 | SEB77374.1 | SAMN05216483_0395 | SAMN05216483_0394 | Hypothetical protein. | Glycosyltransferase involved in cell wall bisynthesis. | 0.994 |
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