Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEB72510.1 | SEB88178.1 | SAMN05216483_0294 | SAMN05216483_0621 | N-acetylmuramoyl-L-alanine amidase. | Muramoyltetrapeptide carboxypeptidase LdcA (peptidoglycan recycling). | 0.677 |
SEB72510.1 | SEC38407.1 | SAMN05216483_0294 | SAMN05216483_1597 | N-acetylmuramoyl-L-alanine amidase. | D-alanyl-D-alanine carboxypeptidase. | 0.435 |
SEB72510.1 | SED11171.1 | SAMN05216483_0294 | SAMN05216483_3153 | N-acetylmuramoyl-L-alanine amidase. | CubicO group peptidase, beta-lactamase class C family. | 0.451 |
SEB72510.1 | SED79052.1 | SAMN05216483_0294 | SAMN05216483_4556 | N-acetylmuramoyl-L-alanine amidase. | N-acetylmuramoyl-L-alanine amidase. | 0.529 |
SEB72510.1 | murC | SAMN05216483_0294 | SAMN05216483_1222 | N-acetylmuramoyl-L-alanine amidase. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.530 |
SEB88178.1 | SEB72510.1 | SAMN05216483_0621 | SAMN05216483_0294 | Muramoyltetrapeptide carboxypeptidase LdcA (peptidoglycan recycling). | N-acetylmuramoyl-L-alanine amidase. | 0.677 |
SEB88178.1 | SEB88224.1 | SAMN05216483_0621 | SAMN05216483_0622 | Muramoyltetrapeptide carboxypeptidase LdcA (peptidoglycan recycling). | Hypothetical protein. | 0.777 |
SEB88178.1 | SEB88274.1 | SAMN05216483_0621 | SAMN05216483_0623 | Muramoyltetrapeptide carboxypeptidase LdcA (peptidoglycan recycling). | Methyltransferase domain-containing protein. | 0.715 |
SEB88178.1 | SEC38407.1 | SAMN05216483_0621 | SAMN05216483_1597 | Muramoyltetrapeptide carboxypeptidase LdcA (peptidoglycan recycling). | D-alanyl-D-alanine carboxypeptidase. | 0.672 |
SEB88178.1 | SEC47447.1 | SAMN05216483_0621 | SAMN05216483_1775 | Muramoyltetrapeptide carboxypeptidase LdcA (peptidoglycan recycling). | N-acetylmuramoyl-L-alanine amidase. | 0.677 |
SEB88178.1 | SED11171.1 | SAMN05216483_0621 | SAMN05216483_3153 | Muramoyltetrapeptide carboxypeptidase LdcA (peptidoglycan recycling). | CubicO group peptidase, beta-lactamase class C family. | 0.707 |
SEB88178.1 | SED29802.1 | SAMN05216483_0621 | SAMN05216483_3542 | Muramoyltetrapeptide carboxypeptidase LdcA (peptidoglycan recycling). | D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4). | 0.796 |
SEB88178.1 | SED79052.1 | SAMN05216483_0621 | SAMN05216483_4556 | Muramoyltetrapeptide carboxypeptidase LdcA (peptidoglycan recycling). | N-acetylmuramoyl-L-alanine amidase. | 0.790 |
SEB88178.1 | SEE35810.1 | SAMN05216483_0621 | SAMN05216483_6013 | Muramoyltetrapeptide carboxypeptidase LdcA (peptidoglycan recycling). | N-acetylmuramoyl-L-alanine amidase. | 0.677 |
SEB88178.1 | murC | SAMN05216483_0621 | SAMN05216483_1222 | Muramoyltetrapeptide carboxypeptidase LdcA (peptidoglycan recycling). | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.770 |
SEB88224.1 | SEB88178.1 | SAMN05216483_0622 | SAMN05216483_0621 | Hypothetical protein. | Muramoyltetrapeptide carboxypeptidase LdcA (peptidoglycan recycling). | 0.777 |
SEB88224.1 | SEB88274.1 | SAMN05216483_0622 | SAMN05216483_0623 | Hypothetical protein. | Methyltransferase domain-containing protein. | 0.671 |
SEB88274.1 | SEB88178.1 | SAMN05216483_0623 | SAMN05216483_0621 | Methyltransferase domain-containing protein. | Muramoyltetrapeptide carboxypeptidase LdcA (peptidoglycan recycling). | 0.715 |
SEB88274.1 | SEB88224.1 | SAMN05216483_0623 | SAMN05216483_0622 | Methyltransferase domain-containing protein. | Hypothetical protein. | 0.671 |
SEC38407.1 | SEB72510.1 | SAMN05216483_1597 | SAMN05216483_0294 | D-alanyl-D-alanine carboxypeptidase. | N-acetylmuramoyl-L-alanine amidase. | 0.435 |
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